Satrajit Ghosh on Center for Open Neuroscience

Satrajit Ghosh on Center for Open Neuroscience/persons/satrajit-ghosh/Recent content in Satrajit Ghosh on Center for Open NeuroscienceHugoenA comparison of neuroelectrophysiology databases/publications/doi-10-1038-s41597-023-02614-0/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1038-s41597-023-02614-0/A guide to the BRAIN Initiative Cell Census Network data ecosystem/publications/doi-10-1371-journal-pbio-3002133/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1371-journal-pbio-3002133/A multimodal cell census and atlas of the mammalian primary motor cortex/publications/doi-10-1101-2020-10-19-343129/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1101-2020-10-19-343129/A reproducible and generalizable software workflow for analysis of large-scale neuroimaging data collections using BIDS Apps/publications/doi-10-1162-imag-a-00074/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1162-imag-a-00074/A very simple, re-executable neuroimaging publication/publications/doi-10-12688-f1000research-10783-2/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-12688-f1000research-10783-2/Align with the NMIND consortium for better neuroimaging/publications/doi-10-1038-s41562-023-01647-0/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1038-s41562-023-01647-0/Analysis of task-based functional MRI data preprocessed with fMRIPrep/publications/doi-10-1101-694364/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1101-694364/Brainhack: Developing a culture of open, inclusive, community-driven neuroscience/publications/doi-10-1016-j-neuron-2021-04-001/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1016-j-neuron-2021-04-001/Bridging the Scientific Knowledge Gap and Reproducibility: A Survey of Provenance, Assertion and Evidence Ontologies/publications/doi-10-1145-3701716-3715483/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1145-3701716-3715483/Data sharing in neuroimaging research/publications/doi-10-3389-fninf-2012-00009/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-3389-fninf-2012-00009/DataLad: distributed system for joint management of code, data, and their relationship/publications/datalad-joss-2021/Mon, 01 Jan 0001 00:00:00 +0000/publications/datalad-joss-2021/Distributed Archives for Neurophysiology Data Integration/projects/dandi/Mon, 01 Jan 0001 00:00:00 +0000/projects/dandi/Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging/publications/zotero-kp46b5su/Mon, 01 Jan 0001 00:00:00 +0000/publications/zotero-kp46b5su/Fantastic containers and how to tame them/publications/zotero-yzynt7j3/Mon, 01 Jan 0001 00:00:00 +0000/publications/zotero-yzynt7j3/HeuDiConv — flexible DICOM conversion into structureddirectory layouts/publications/doi-10-21105-joss-05839/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-21105-joss-05839/How to make brain imaging research efficient and reproducible: building software and standards/publications/zotero-sarh7hnt/Mon, 01 Jan 0001 00:00:00 +0000/publications/zotero-sarh7hnt/IQ in Typical Development: A Mega-Analysis of the Historical Literature/publications/doi-10-1016-j-biopsych-2021-02-385/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1016-j-biopsych-2021-02-385/Microscopy-BIDS: An Extension to the Brain Imaging Data Structure for Microscopy Data/publications/doi-10-3389-fnins-2022-871228/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-3389-fnins-2022-871228/Neurodesk: an accessible, flexible and portable data analysis environment for reproducible neuroimaging/publications/doi-10-1038-s41592-023-02145-x/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1038-s41592-023-02145-x/NIDM-Workflow - The Evolution of Provenance in Neuroimaging/publications/zotero-4f4fcvy7/Mon, 01 Jan 0001 00:00:00 +0000/publications/zotero-4f4fcvy7/Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python/publications/doi-10-3389-fninf-2011-00013/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-3389-fninf-2011-00013/OME-Zarr: a cloud-optimized bioimaging file format with international community support/publications/doi-10-1007-s00418-023-02209-1/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1007-s00418-023-02209-1/OME-Zarr: a cloud-optimized bioimaging file format with international community support/publications/doi-10-1101-2023-02-17-528834/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1101-2023-02-17-528834/ReproIn: automatic generation of shareable, version-controlled BIDS datasets from MR scanners/publications/zotero-m5e9bt5h/Mon, 01 Jan 0001 00:00:00 +0000/publications/zotero-m5e9bt5h/SciOps: Achieving Productivity and Reliability in Data-Intensive Research/publications/doi-10-48550-arxiv-2401-00077/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-48550-arxiv-2401-00077/TemplateFlow: a community archive of imaging templates and atlases for improved consistency in neuroimaging/publications/doi-10-1101-2021-02-10-430678/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1101-2021-02-10-430678/TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models/publications/doi-10-1038-s41592-022-01681-2/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1038-s41592-022-01681-2/The best of both worlds: using semantic web with JSON-LD. An example with NIDM-Results & DataLad/publications/zotero-dgvnva4t/Mon, 01 Jan 0001 00:00:00 +0000/publications/zotero-dgvnva4t/The Brain Imaging Data Structure (BIDS) Specification, Version 1.3.0/publications/doi-10-5281-zenodo-3720628/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-5281-zenodo-3720628/The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments/publications/doi-10-1038-sdata-2016-44/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1038-sdata-2016-44/The Brain Imaging Data Structure: a standard for organizing and describing outputs of neuroimaging experiments/publications/doi-10-1101-034561/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1101-034561/The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data/publications/doi-10-1002-hbm-25351/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1002-hbm-25351/The past, present, and future of the brain imaging data structure (BIDS)/publications/doi-10-1162-imag-a-00103/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-1162-imag-a-00103/The Past, Present, and Future of the Brain Imaging Data Structure (BIDS)/publications/doi-10-48550-arxiv-2309-05768/Mon, 01 Jan 0001 00:00:00 +0000/publications/doi-10-48550-arxiv-2309-05768/Variability of the Neuroimaging Results Across OS, and How to Avoid it/publications/zotero-7u85zj95/Mon, 01 Jan 0001 00:00:00 +0000/publications/zotero-7u85zj95/